Optimization of the computations of HOIs and integration in the Frites Python package
Mentors:Daniele Marinazzo, ecombrisson
Activity patterns of neurons have so far been examined both singly and in pairs. Higher order interactions (HOIs), or non-pairwise interactions between neurons, are being studied in an effort to improve analysis. The type and quantity of information stored in groups (pairs or multiplets) in the brain is revealed by information about organizational structure (o-info). Various methods to optimize the o-info implementations in NumPy and Jax, as well as techniques for plotting the HOIs and integrating them with Frites will be included.
- Methods for optimization implementation in NumPy and Jax
- Plotting functions for HOIs
- HOI o-info integration with Frites Python package