| 2024 |
INCF Working Group on Standardized Data |
- Recommended directory structure and file naming convention (expected)
- Recommended organization of the metadata (expected)
- Specifications of file formats for the data and metadata (expected)
- Finalization of BIDS Extension Proposal (BEP032) (expected)
|
| 2024 |
INCF/OHBM Working Group on checklists from transparent methods reporting in neuroscience (eCobidas) |
- COBIDAS checklist web app (expected)
|
| 2024 |
INCF Working Group on Electrophysiology Stimulation Ontology |
- Prototype visualization or validation/comparison tool (expected)
- so users can verify that the stimuli as stored in the file are as they intended
- for archives, so stimuli can be visualized when browsing datasets
- Draft proposal best practices for use of the ontology for archives (expected)
- Draft proposal for extension for parameterized 2D visual stimuli (expected)
|
| 2024 |
INCF Working Group on Reproducibility and Best Practices in Human Brain Imaging |
- BIDS PET imaging specification (expected)
- BIDS NIRS specification (expected)
- BIDS eye-tracking specification (expected)
- BIDS-matlab (expected)
- Enhancement of the BIDS-starter kit (expected)
- NI-DM IPython Notebooks (expected)
- NIDASH Ontology (expected)
- Developing ReproLake: NIDM metadata repository for a number of publicly-available datasets and derived data (expected )
- Develop the NIDM model further: harmonized terminologies, additional tools, provenance for pipelines (expected)
|
| 2024 |
INCF Working Group on Standardized Representations of Network Structures |
- Converting TVB models to equivalents in NeuroML/LEMS (expected)
- Extend NeuroML to incorporate rate based/neural mass models (expected)
- Convert multi area cortical model to standardised format (expected)
- Whole brain connectivity datasets in standardised formats (expected)
- Incorporate NetPyNE UI into OSB (expected)
- Improve interoperability of NeuroML/NineML (expected)
|
| 2024 |
INCF Working Group on ARTEM-IS |
- A human-readable template for description of a study, as would be suitable for submission as a supplementary document at the time of journal article submission, or alongside a preregistration (expected)
- App functionality to allow export of a completed template into the following (expected):
- A machine-readable data file
- A human-readable output
- App functionality to allow import of previously filled template information (e.g., Equipment fields from an equipment vendor; a research team’s standard operating procedure; expected)
- App-integrated ‘help’ functions (expected)
- Guidance to support a user in completing the template (expected)
- Standalone explanation & elaboration documents (expected)
- Training materials for researchers new to the field of EEG (expected)
|
| 2024 |
INCF Working Group on NWB |
- Propose/contribute content for a “.gitHub” repository for the GitHub organization, including a structured list of best practices markdown documents (e.g., how to adopt a MATLAB Community Toolbox).
- Develop a template repository for seed/orphaned repos encompassing: README, LICENSE file, code of conduct, CONTRIBUTING.md)
- Contribute initial best practices mark documents for early-stage/orphaned GitHub repository stewardship, wrt GitHub DevOps aspects (e.g., repo branch management) & MATLAB aspects (e.g., File Exchange linking)
- (Stretch Goal) Create a 'dashboard' that gives an at-a-glance view of status and engagement metrics for each MATLAB community toolbox in the organization
|
| 2024 |
INCF/MathWorks Working Group on Early-stage MATLAB Community Toolboxes |
- Propose/contribute content for a “.gitHub” repository for the GitHub organization, including a structured list of best practices markdown documents (e.g., how to adopt a MATLAB Community Toolbox).
- Develop a template repository for seed/orphaned repos encompassing: README, LICENSE file, code of conduct, CONTRIBUTING.md)
- Contribute initial best practices mark documents for early-stage/orphaned GitHub repository stewardship, wrt GitHub DevOps aspects (e.g., repo branch management) & MATLAB aspects (e.g., File Exchange linking)
- (Stretch Goal) Create a 'dashboard' that gives an at-a-glance view of status and engagement metrics for each MATLAB community toolbox in the organization
|
| 2024 |
INCF Working Group on NIDM (NeuroImaging Data Model) |
- NeuroImaging Data Model development: further develop the model to include harmonized terminology and provenance information for pipelines and datasets (expected)
- Develop input interfaces to save information in standardized provenance model (eg. ReproSchema) (expected)
- Developing ReproLake: NIDM metadata representation for a number of datasets and derived data will be made available in "ReproLake" hosted by NIF (expected)
|
| 2024 |
INCF Working Group on Neuroimaging Quality Control |
- Manual for QC of neuroimaging data (expected)
- Protocols of QC use cases (expected)
- QC tools (expected)
|
| 2024 |
INCF Working Group on Psychophysics Software with MATLAB |
- Organize a public session for psychophysics software community projects to showcase new developments
- Google Doc conveying recommendations for priority directions for established psychophysics MATLAB community toolboxes (e.g., Psychophysics Toolbox)
- Google Doc conveying recommendations for emerging psychophysics software needs, which might be served by new or emerging MATLAB community toolboxes, commercial offerings, and/or MathWorks product updates
|
| 2024 |
INCF/OCNS Working Group on Computational Neuroscience Software |
Best practices in software development (expected 2024)
|
| 2021 |
INCF/OCNS Working Group on Computational Neuroscience Software |
- Regular developer sessions for computational neuroscience tool developers
|
